Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912962.1_cds_XP_016463037.1_56201
CDS Infomation

[gene=LOC107786117] [db_xref=GeneID:107786117] [protein=taxadiene 5-alpha hydroxylase-like] [protein_id=XP_016463037.1] [location=complement(join(147486..147779,147898..148085,148187..149162))] [gbkey=CDS]
Sequence

ATGGCTCTTTCTTTGTTAAGCCTAATCAACTTTCCTCTTTCTTTCTCCTTATCAATCTTT
TTCATAATTGTCTTTTCCATTCTATTGAAACATTACAAAGGCTACAAACACATTACCAAA
AAGAAACTTCCACCTGGAGAAATGGGACTTCCATGGATTGGTGAAACCATAGAATTTTAC
AAAGCCCAAAAAAAGAACAAATTATTTGAAGAATTCGTTCAGCCCCGGATCGAAAAATAT
GGAAAGACATTCAAAACAAGACTAATGGGATCACCAACAGTAGTTGTATGTGGAGCAGAA
GCTAATATGTTCTTTTTGTCTAATGAATTCAAATTGGTAATAAGTTCATGGCCTACTTCT
TCAGTTGAGCTAATGGGCAAGAATTGCATTATGGAGAAACAAGGAGACGCGCATCGATGC
CTTCGTGGGATTATATCTTCAAGTCTTGCCTCTTTTAGCCTAGATGCTATGGTTCCTAAA
ATTTGTAACACAATTCAATCTCACTTAGACAAAAATTGCAATGGCCAAGACCAGATCATA
AAACTGTATCATCTGACCAAATCTTTGACGTTCAAAATTGTGTTCGAGTGTTTTTTGGGG
ATAGTAGTCAAACCAGGATTACTTGAAACGTTTGAGAGAGTCTTGGAAGGTGCTTTTTCA
CCCCCATTTAAGTTTCCAGGATCTAAGTTTTCAAGGGCAAAAAATGCAAGATTGAAAATA
GAGAAAATTCTTGTTGAGGTTATAAGGGAGAAGAGAAGAGAGATAGAATTAGGAGAGGAG
AAAGAAGGGAAGTTAGACGAGGCATTACTTTCTCGGTTAGTGAAAGCGTTGATTCGCGGT
GAGGTAAGTGAAGAAGAGGTCGTTGATAATGTTGTTTTGCTAGTGTTTGCTGCACATGAT
ACAACTTCTTTTGCCATTGCTATGACATTTAGGATGTTGGCTCATCATCCCACCTGCTAT
TCTCTTCTCCTTCAAGAACATGCTAATATAATGAGTAACAAAGGATCGGATGAGATATTA
TCGTTGGAAGATACAAAAAGGATGAAATATACCTGGCAAGTTGCGCGGGAAAGCATGAGG
CTGTTTCCTCCTATCTTTGGTTCTTTCAGAAAAGCAATTGCTGACATTGAATTTGAAGGA
TTCACTATTCCAAAAGGTTGGAAGGTATTGTGGACAACATATGGTACACATTATAGTCCA
GACTATTTTAAAGAGCCCCAAAATTTTGACCCAAGTAGATTTGAGGAGCCTGTTCAACCA
TATGCATTTGTACCATTTGGAGGAGGGCCAAGGCTGTGTGCAGGGTACCAATTGGCAAAA
CTAAACATTCTTATATTTGTTCATTACGTTGTGACACGATATGATTGGTCCTTAATAAAT
CCTGACGAACCAATTGTCATGGATCCCCTTCCCTTCCCTTCCAAAGGAATGCCCATTAAA
ATTTCTCCCAAGTTTTAA

Peptide Sequence

PEP ID

XP_016463037.1
PEP Infomation

PREDICTED: taxadiene 5-alpha hydroxylase-like [Nicotiana tabacum]
Sequence

MALSLLSLINFPLSFSLSIFFIIVFSILLKHYKGYKHITKKKLPPGEMGLPWIGETIEFY
KAQKKNKLFEEFVQPRIEKYGKTFKTRLMGSPTVVVCGAEANMFFLSNEFKLVISSWPTS
SVELMGKNCIMEKQGDAHRCLRGIISSSLASFSLDAMVPKICNTIQSHLDKNCNGQDQII
KLYHLTKSLTFKIVFECFLGIVVKPGLLETFERVLEGAFSPPFKFPGSKFSRAKNARLKI
EKILVEVIREKRREIELGEEKEGKLDEALLSRLVKALIRGEVSEEEVVDNVVLLVFAAHD
TTSFAIAMTFRMLAHHPTCYSLLLQEHANIMSNKGSDEILSLEDTKRMKYTWQVARESMR
LFPPIFGSFRKAIADIEFEGFTIPKGWKVLWTTYGTHYSPDYFKEPQNFDPSRFEEPVQP
YAFVPFGGGPRLCAGYQLAKLNILIFVHYVVTRYDWSLINPDEPIVMDPLPFPSKGMPIK
ISPKF

Transcript Sequence

Gene sequence data has not been registered.